Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLKKVAMGITVVMASSLLLVGCGSSDDSSKDKKSTDTKQTETKKTAKTDGTMTDGTYKLEEKNFDDKGWKGFMSIEVKDGKITKANYDYKNK--DGKLKSE-DADYEKAMKDKVGTGPQEYLKQLSDSLVKNQSAASVEVVSGATHSSD----AFINYANQLIQAAQKADTTTISINNLAKMEDGTYKLEEQNYAHGYRVVFSMDVKDGKITKSDYNYVDKDGKLKSDDADYEKNMKAKSGTGPKEYIPALNKSLVEKQDVAAVDTVSGATNSSNQFKIYAAQLQNAAQNGNTDTIKVYNLVEAE |
| 1DAR Chain:? ((476-599)) | -----------------------------------VGKPQVAYRETITKP-VDVEGKFIRQTGG---RGQYGHVKIKVEPLP-RGSGFEFVNAIVGGVIPKEYIPAVQKGIEEAMQSGPLIGFPVVD---------IKVTLYDGSYHEVDSSEMAFKIAGSMAIKEAVQKGDP------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1DAR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 19843 for 855 contacts (23.2/contact) +
2D Compatibility (PS) -12226 + (NN) -3796 + (LL) 9956
1D Compatibility (HY) -3600 + (ID) 1050
Total energy: 9127.0 ( 10.67 by residue)
QMean score : 0.361
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