Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--MAKPYGVVIISHSKDVAKGVHDIIKEIAPDVS---ITHAGGTED---GRIGTSFDAVN----------EAIENNEANKVYTFYDLGSAKMNIETVEEISEKEII--LFNAPILEGAYATAAQVQMDEKPEVIAANLKTIEIK--
1CS0 Chain:A ((936-1073))
NSTMKKHGRALLSVREGDKERVVDLAAKLLKQ--GFELDATHGTAIVLGEA-GINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTS---GRRAIEDSRVIRRSALQYKVHYDTTLNGGFATAM--ALNADATEKVISVQEMHAQIK
General information:
TITO was launched using:
RESULT:
Template:
1CS0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44859 for 779 contacts (-57.6/contact) +
2D Compatibility (PS) -12619 + (NN) -4232 + (LL) 656
1D Compatibility (HY) -800 + (ID) 1050
Total energy: -62904.0 ( -80.75 by residue)
QMean score : 0.466
(partial model without unconserved sides chains):
PDB file :
Tito_1CS0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1CS0-query.scw
PDB file :
Tito_Scwrl_1CS0.pdb
: