Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPNIKEIAKLAGVSVTTVSRVLNNHPYVAEEKRVRVQAVIDELDYSPNRSAMDLARGKTNTVGVIIPYNDHPWFDKIVNGILEVAFKNRYSVTLFPTGYDPKEEEKYLMRLKTKQVDGLIITSRANNWDVILPYLAYG-PIIACEYVES-KEVSCSYIDRVKAYRAGFQFLEDEGYKKVAFTAGRASRESTSTYGKINAYEQVFGPV-GD---NRFLSECYTLEDGLKAGEHFFAAGKDWPDAIYANGDEVAAGVMYHVKKLGLRVPEDVAILGQENLPIGKVL--EITTLDHNLKKLGENAFTIFEQGKLQ------RIKVEHELIRRKTV |
| 2HSG Chain:A ((2-331)) | NVTIYDVAREASVSMATVSRVVNGNPNVKPSTRKKVLETIERLGYRPNAVARGLAS-KTTTVGVIIP--SNIFYAELARGIEDIATMYKYNIILSNSDQNQDKELHLLNNMLGKQVDGIIFMSGNVTEEHVEELKKSPVPVVLAASIESTNQIPSVTIDYEQAAFDAVQSLIDSGHKNIAFVSGTLEEP-INHAKKVKGYKRALTESGLPVRDSYIVEGDYTYDSGIEAVEKLLE-EDEKPTAIFVGTDEMALGVIHGAQDRGLNVPNDLEIIGFDNTRLSTMVRPQLTSVVQPMYDIGAVAMRLLTKYMNKETVDSSIVQLPHRIEFRQST |
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General information:
TITO was launched using:
| RESULT:
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Template: 2HSG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -134557 for 2606 contacts (-51.6/contact) +
2D Compatibility (PS) -33461 + (NN) -10213 + (LL) -44
1D Compatibility (HY) -15600 + (ID) 4400
Total energy: -198275.0 ( -76.08 by residue)
QMean score : 0.468
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