Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MKIRNLTKKMDDN----LVLKDVSFDLKAGEITALIGRNGVGKTTLFSTMTGIYLPDEGDVFLDEESI-----FKHPEVKQQLFFLEDNMNHFNTYSVQTVVKIYRQIYTTFDEAFFNELMQQFEL-----PMKAKLMSFSKGRKALFFIILAFSLNVRFLLLDEPLDGLDIIIKKQILATIKDTVKKRGTSVVIASHRLEELEAIADRVIVLKGASVE-----LDYYLEDMRTDAVKIQVAFKTKKIPGFVKNNAQLLYRNG--RIYTLLVTENASS--FLAELRLEEPVLLEEMSISIEDI-------FTVHLANDKIDYYEI------------- |
| 3TUZ Chain:H ((23-362)) | HMIKLSNITKVFHQGTRTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGSVLVDGQELTTLSESELTKARRQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEVKRRVTELLSLVGLGDKHDSYPSNLSGGQKQRVAIARALASNPKVLLCDQATSALDPATTRSILELLKDINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQDTVSEVFSHPKTPLAQKFIQSTLHLDIPEDYQERLQAEPFTDCVPMLRLEFTGQSVDAPLLSETARRFNVNNNIISAQMDYAGGVKFGIMLTEMHGTQQDTQAAIAWLQEHHVKVEV |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TUZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -191538 for 2150 contacts (-89.1/contact) +
2D Compatibility (PS) -31516 + (NN) -7040 + (LL) 0
1D Compatibility (HY) -7200 + (ID) 3050
Total energy: -240344.0 ( -111.79 by residue)
QMean score : 0.434
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