Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----MSKPNVVQLNNQYIN-----DENLKKRYEAEELRRKNRLMGWVLIF------------VMLLFILPTYNLVKSYRTLQERRQEVVKLTKDYQTLTNRTENQKLLAKQLKNPD--YVQKYARAK---YYFSKTGEMIYPLPDLLPK-------- |
| 1ODH Chain:A ((14-170)) | LSWDINDVKLPQNVKTTDWFQEWPDSYVKHIYSSDDRNAQRHLSSWAMRNTNNHNSRILKKSCLGVVVCSRDCSTEEGRKIYLRPAICDKARQKQQRKSCPNCNGPLKLIPCRGHGGFPVTNFWRHDGRFIFFQSKGEHDHPRPETKLEAEARRAMK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ODH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -3613 for 798 contacts (-4.5/contact) +
2D Compatibility (PS) -12584 + (NN) 3219 + (LL) 0
1D Compatibility (HY) 1600 + (ID) 950
Total energy: -12328.0 ( -15.45 by residue)
QMean score : 0.155
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