Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------MRVSQTYGLVLYNRNYREDDKL-------VKIF--------------------TETEGKRMFFVKHASKSKFNAVLQPLTIAHFILKINDN-GLSYIDDYKEVLAF-----QETNSDLF-KLSYASYITSLADVAISDNVADAQLFIFLKKTLEL-------IEDGLDYEI-----LTNIFEVQ----------------LLERFGVALNF------------HDCVFCHRVGLPFDFSHKYSGLLCP--NHYYKDERRNHLDPNM-----------LYLINRFQSIQFD-------DLQTISVKPEMKLKIRQFLDMIYDEYVGIHLK----SKKFIDDLSSWGSIMKSD |
| 4WA0 Chain:A ((1-358)) | TSVPSSPLDYAIFSKGALNTNKNLTVENGSVYSGGDLTIDGGAVFNIDNLISKGEMVINQDSDSRCRDNNIVVRNIIYVEKSL-AN-RISPRSTNIDAKTIYVGQEMQLYGAGSYKFVQLFSDSNVKLAGPGVNMEVSTLASIRGTLEVIDGATVTLKSNSAVYCNSLVVRNGSRLILENGAKLYLATTPDASTIISIQNNGGTISYSSSFSYPSPPAEIDEIRNRDYTSGLLTTPLPADSVGSNQLGSTADTSQTPPQIVIYGESYINDNEARIEISARLGSPIVDFSTLQLHLISR-GNITFVGGGLTIMNGSIISLGSTFNINATG------NPYAGLTLKYQMPSPPIQQDIESNTGIQPSQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4WA0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -2930 for 1568 contacts (-1.9/contact) +
2D Compatibility (PS) -24337 + (NN) 9106 + (LL) 1064
1D Compatibility (HY) 12000 + (ID) 650
Total energy: -5747.0 ( -3.67 by residue)
QMean score : -0.010
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