Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTKRALISVSDKSGIIDFAKELKNLGWDIISTGGTKVALDDAGVETIAIDDVTGFPEMMDGRVKTLHPNIHGGLLARRDADSHLQAAKDNNIELIDLVVVNLYPFKETILRPDVTYDLAVENIDIGGPSMLRSAAKNHASVTVVVDSADYATVLGELADASQTTFKTRQRLAAKAFRHTAAYDALIAEYFTAQVGEAKPEKLTITY-DLKQAMRYGENPQQDADFYQKALPTDYSIASAKQLNGKELSFNNIRDADAAIRIIRDFKDSPTVVALKHMNPCGIGQADDIETAWDYAYEADPVSIFGGIVVLNREVDAATAEKMHPIFLEIIIAPSYSEEALAILTNKKKNLRILELPFDAQAASEVEAEYTGVVGGLLVQNQDVVAENPSDWQVVTDRQPTEQEATALEFAWKAIKYVKSNGIIITNDHMTLGLGAGQTNRVGSVKIAIEQAKDHLDGAVLASDAFFPFADNIEEIAAAGIKAIIQPGGSVRDQESIDAANKHGLTMIFTGVRHFRH |
1ZCZ Chain:A ((13-464)) | -MKRILVSLYEKEKYLDILRELHEKGWEIWASSGTAKFLKSNGIEANDVSTITGFENLLGGLVKTLHPEIFAGILGPE--------------PRWDVVFVDLYPP---------------PDIDIGGVALLRAAAKNWKKVKPAFDMETLKLAIEI------DDEETRKYLAGMTFAFTSVYDSIRANQFVEG--------ISLAFKREDLQLRYGENPHEKAFVYGKPA-------FEILHEGKTISFNNILDAENAWFMAKNLP-RMGAVVVKHQSPCGAAIGEDKVEIVKKAIEADDESSFGGILAVNFEMDEEVAKSLK-KYLEVIVAPSFTQEAIEVL-SKKK-VRLLKPGDY------ASWAGKMAFGSLVLSERKYP---EGNFELVVGEPLSEKELEDLEFAYRVVEGAKSNAVLIAKDGVTVGIGSGQPSRKRAAWIATVMAGEKAKGAVAASDAFFPFPDSLEILAQAGVKAVVAPLGSIRDEEVIEKARELGITFYKAPSRVFRH |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ZCZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -226573 for 3719 contacts (-60.9/contact) +
2D Compatibility (PS) -48862 + (NN) -11866 + (LL) 3728
1D Compatibility (HY) -29200 + (ID) 8300
Total energy: -321073.0 ( -86.33 by residue)
QMean score : 0.457
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