Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSNWNLDNFDNLHSSLAESAYNSRPNSFPELFETDSVTEVKFSQPSEDNKGQITQGGTNLPNDGIVYLQ--PDKSLKSIDENVKVRVPDVNGGYHSEHCVTNSYQKGY
4Q1A Chain:B ((149-209))
------------------SVYSDRYIFASNLYESESMNETEWTIYQDWHDWMNNQFGQSLELDGIIYLQATPETCLHRIYLRGRNEEQGIPLEYLEKLHYKHESWLLH
General information:
TITO was launched using:
RESULT:
Template:
4Q1A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3802 for 268 contacts (14.2/contact) +
2D Compatibility (PS) -6239 + (NN) -33 + (LL) 760
1D Compatibility (HY) -3600 + (ID) 950
Total energy: -6260.0 ( -23.36 by residue)
QMean score : 0.201
(partial model without unconserved sides chains):
PDB file :
Tito_4Q1A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4Q1A-query.scw
PDB file :
Tito_Scwrl_4Q1A.pdb
: