Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRDFEELFDKVKPIVMKLRRNYFVQLWEYDDWIQEGRIVLFRLLEEHPYLLDNESKLFIYFKTKFSNYLNDVLRHQDCQKRQFNKMPYEEISEVSHYVKSKGLVLDDYIAYRDTLTKVEETLSDIDKEKFEKLISGERFAGKKQFIRDIQPFFNAFKAD--
1FHO Chain:A ((1-119))
MGDTGKLGRII--------RHDAFQVWEGDEPPKLRYVFLFR------------------------NKIMFTEQDASTSPPSYTHYSSIRLDKYNIRQHTTD---EDTIVLQPQEPGLPSFR--IKPKDFET-----SEYVRKAWLRDIAEEQEKYAAERD
General information:
TITO was launched using:
RESULT:
Template:
1FHO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2001 for 761 contacts (-2.6/contact) +
2D Compatibility (PS) -11802 + (NN) 1139 + (LL) 3504
1D Compatibility (HY) -1600 + (ID) 1100
Total energy: -11860.0 ( -15.58 by residue)
QMean score : 0.086
(partial model without unconserved sides chains):
PDB file :
Tito_1FHO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FHO-query.scw
PDB file :
Tito_Scwrl_1FHO.pdb
: