Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKIRLSKFIKMIVVILFLISVAASFYFFHVAQVRDDKSFISNGQRKPGNSLYAYDKSFDKLLKQKIEMTNQNIKQVAWYVPAA--KKTHKTAVVVHGFANSKENM--KAYGWLFHKLGYNVLMPDNIAHGESHGQLIGYGWN-DRENIIKWTEMIVDKNPSSQITLFGVSMGGATVMMASGEKLPSQVVNIIEDCGYSSVWDELKF--QAKEMYGLPAFPLLYEVSTISK-IRAGF-S-YGQASSVEQLKKNNLPALFIHGDKDNFVPTSMVYDNYKATAGKKELYIVKGAKHAKSFETEPEKYEKRISSFLKKYEK |
| 2WTM Chain:A ((6-249)) | --------------------------------------------------------------------IDCDGIKLNAYLDMPKNNPEKCPLCIIIHGFTGHSEERHIVAVQETLNEIGVATLRADMYGHGKSDGKFEDHTLFKWLTNILAVVDYAKKLDFVTDIYMAGHSQGGLSVMLAAA-MERDIIKALIPLSPAAMIPEIARTGELLGLKFD-PENIPDELDAWDGRKLKGNYVRVAQTIRVEDFVDKYTKPVLIVHGDQDEAVPYEASVAFSKQYK-NCKLVTIPGDTHCY--DHHLELVTEAVKEFMLEQIA |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WTM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -69449 for 2018 contacts (-34.4/contact) +
2D Compatibility (PS) -24821 + (NN) -7385 + (LL) 6152
1D Compatibility (HY) -3200 + (ID) 2100
Total energy: -100803.0 ( -49.95 by residue)
QMean score : 0.360
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