Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTVLEQKLDHLVSQILLKAENQHELLFGTCQSDVKLTNTQEHILMLLSQE-QLTNSDLAKKLNISQAAVTKAVKSLISQDMLKANKDSKDARITYFELSELAKPIADEHTHHHDNTLGVYGRLVNHFSKDEKVVLERFLDLFSRELEG
3CJN Chain:A ((21-158))
------GLEGYAPYLMNRIMGRYNANLRKEMTALGLSTAKMRALAILSAKDGLPIGTLGIFAVVEQSTLSRALDGLQADGLVRREVD--DQRSSRVYLTPAGRAVYDRLWPHMR---ASHDRMFQGITPQERQAFLATLNKMLANIRV
General information:
TITO was launched using:
RESULT:
Template:
3CJN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -60630 for 868 contacts (-69.9/contact) +
2D Compatibility (PS) -14145 + (NN) -6960 + (LL) 1036
1D Compatibility (HY) -4000 + (ID) 950
Total energy: -85649.0 ( -98.67 by residue)
QMean score : 0.481
(partial model without unconserved sides chains):
PDB file :
Tito_3CJN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3CJN-query.scw
PDB file :
Tito_Scwrl_3CJN.pdb
: