Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTLQDQIIKELGVKPVINPSQEIRRSVEFLKDYLLKHSFLKTYVLGISGGQDSTLAGRLAQLAVEELRADTGENYQFIAIRLPYGI--QADEEDAQKAL-DFIKPDIALTINIKEAVDGQVRALNAA-GVEITDFNKGNIKARQRMISQYAVAGQYAGAVIGTDHAAENITGFFTKFGDGGADLLPLFRLNKSQGKQLLAELGADKALYEKIPTADLEENKPGIADEIALGVTYQEIDAYLEGKVVSDKSRGIIENWWYKGQHKRHLPITIFDDFWK |
3FIU Chain:A ((6-248)) | ---------------DFSPKEYSQKLVNWLSDSC-MNYPAEGFVIGLSGGIDSAVAASLAVKT-G---------LPTTALILPSDNNQHQDMQDALELIEML--NIEHYTISIQPAYEAFLASTQSFT----QLVIKGNAQARLRMMYLYAYAQQYNRIVIGTDNACEWYMGYFTKFGDGAADILPLVNLKKSQVFELGKYLDVPKNILDKAPSAGLW---QGQTDEDEMGVTYQEIDDFLDGKQVSAKALERINFWHNRSHHKRKLALTPNF---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FIU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -42986 for 1841 contacts (-23.3/contact) +
2D Compatibility (PS) -25291 + (NN) -7113 + (LL) 2836
1D Compatibility (HY) -12400 + (ID) 4550
Total energy: -89504.0 ( -48.62 by residue)
QMean score : 0.415
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