Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MITKFPDQWQDKLTQRQFDDLTDIQNKLFQAITDGDNILGISPTGTGKTLAYLFPTLLKLQPK-KSQQLLILAPNSELAGQIFDVTKEWAEPLGLTAQLFLSGSSQKRQIERL-KKGPEILIGTAGRVFELVKLKKIKMMNINTIVLDEFDELLGDSQYHFVDNIINRVPRDQQMIYISATNKLDNSKLAD----NTITI--DLSDQKLDTIKHYYITVDK-RERTDLLRKFSN-IPDFRGLVFFNSLSDLGACEERLQFNRASAVSLASDINIKFRKVILEKFKNHDISLLLGTDLVARGIDIDNLEYVINFDIARDKETYTHRSGRTGRMGKEGCVITFVTHKEELKQLKKYATVAELVLHNQKLHLK |
| 3EIQ Chain:A ((39-399)) | ----LSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAM---MDQKERDVIMREFRSG---VLITTDLLA--IDVQQVSLVINYDLPTNRENYIHRIGRG-------VAINMVT-EEDKRTLRDIETFYNTSIEEMPL--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EIQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -194791 for 2677 contacts (-72.8/contact) +
2D Compatibility (PS) -36471 + (NN) -16145 + (LL) 996
1D Compatibility (HY) -26000 + (ID) 4350
Total energy: -276761.0 ( -103.38 by residue)
QMean score : 0.535
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