Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPFVKIDLFEGRSQEQKNELAREVTEVVSRIAKAPKENIHVFINDMPEGTYYPQGELKKK
1BJP Chain:B ((1-59))
-PIAQIHILEGRSDEQKETLIREVSEAISRSLDAPLTSVRVIITEMAKGHFGIGGELASK
General information:
TITO was launched using:
RESULT:
Template:
1BJP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9746 for 323 contacts (-30.2/contact) +
2D Compatibility (PS) -6665 + (NN) -5913 + (LL) 208
1D Compatibility (HY) -4000 + (ID) 1300
Total energy: -27416.0 ( -84.88 by residue)
QMean score : 0.662
(partial model without unconserved sides chains):
PDB file :
Tito_1BJP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BJP-query.scw
PDB file :
Tito_Scwrl_1BJP.pdb
: