Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKHQSRCKPDSPKKLMELNMTKKIFLFICATLLVGIALYTPTTSIFNHNNVYAATKKAKIKFNKTQKKIVKKAREYAKSGHMSKDSIIEKLKKDSKKYRQEDINFVINNLKVDYKKNALISAKIYSKTMNLSKQSIFEQLYSESPDKATHSDKFTKEESQYAIDHLK-VDFK---ENALETAKSYQSSSSLSKEEIYKQLTSTLGDKFTNDEAQYAVDHLK |
| 3D5L Chain:A ((58-152)) | -----------------------------------------------------------------------------------------------------------------DQQAKAYSRMLDYLSYQMRTESDIVKKLKE---------IDTPEEFVEPILKKLRGQQLIDDHAYAASYVRTMINTDLKGPGIIRQHLRQ---KGIGESDIDDALTQFT |
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General information:
TITO was launched using:
| RESULT:
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Template: 3D5L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 4567 for 584 contacts (7.8/contact) +
2D Compatibility (PS) -9845 + (NN) -4055 + (LL) 8692
1D Compatibility (HY) 0 + (ID) 550
Total energy: -1191.0 ( -2.04 by residue)
QMean score : 0.607
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