Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQVEVDLPNHSYHIKIEEGCFSEAGDWVSHLWQKQMITIITDSNVEILYGESLVNQLKKQGFTVHVFSFAAGEASKTLEVANRIYGFLAKHHMTRSDGIIALGGGVVGDLAAFVASTYMRGIHFLQIPTSLTAQVDSSIGGKTGVNTSFAKNMVGTFAQPDGVLIDPVTLKTLGNRELVEGMGEVIKYGLIDDIKLWHILEEMDGTIDSILDS-------ALAIIYHSCQVKRKHVLADQYDKGLRMHLNFGHTIGHAIEVHAGYGEIMHGEAVAIGMIQLSRVAERKNLMPRGISQDIYNMCLKFGLPVHYAEWDKDVLFDILSHDKKASGQFIKIVILPQLGSATVHQIPLEEMRDYLEK |
| 1XAH Chain:A ((1-347)) | MKLQTTYPSNNYPIYVEHGAIKYIGTYLNQ--F-DQSFLLIDEYVNQYFANKFD------NVHK--VIIPAGEKTKTFEQYQETLEYILSHHVTRNTAIIAVGGGATGDFAGFVAATLLRGVHFIQVPTTILA-HDSSVGGKVGINSKQGKNLIGAFYRPTAVIYDLDFLKTLPFKQILSGYAEVYKHALLNGESATQDIE---QHF--KDREILQSLNGMDKYIAKGIETKLDIVVADEKEQGVRKFLNLGHTFGHAVEYYH---KIPHGHAVMVGIIYQFIVANALFD-SKHDISHYIQYLIQLGYPLD----------------------GVQMVLMRQFGDIVVQHVDQLTLQHACEQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1XAH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -220538 for 2624 contacts (-84.0/contact) +
2D Compatibility (PS) -33039 + (NN) -6032 + (LL) 2648
1D Compatibility (HY) -22800 + (ID) 4850
Total energy: -284611.0 ( -108.46 by residue)
QMean score : 0.402
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