Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MELVIRDIRKRFQ----ETEVLRGASYRFYSGKITGVLGRNGAGKTTLFNILYGDLAADNGTICL------LKDNHEYPLTDKDIGIVYSENYLPEFLTGYEFVKFYMDLHPSDDLMTIDDYLDFME-IGQTERH-RIIKGYSDGMKSKLSLICLMISKPKVILLDEPLTAVDVVSSIAIKRLLLELSEDH--IIILSTHIMALAEDLCDIVAVLDKGKLQ------TLDIDRKHEQFEERLLQVLKGDEYDK--------------------------------------------------------------------------------------- |
3TUZ Chain:H ((23-362)) | HMIKLSNITKVFHQGTRTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGSVLVDGQELTTLSESELTKARRQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEVKRRVTELLSLVGLGDKHDSYPSNLSGGQKQRVAIARALASNPKVLLCDQATSALDPATTRSILELLKDINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQDTVSEVFSHPKTPLAQKFIQSTLHLDIPEDYQERLQAEPFTDCVPMLRLEFTGQSVDAPLLSETARRFNVNNNIISAQMDYAGGVKFGIMLTEMHGTQQDTQAAIAWLQEHHVKVEV |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TUZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -162374 for 1816 contacts (-89.4/contact) +
2D Compatibility (PS) -25233 + (NN) -10144 + (LL) 0
1D Compatibility (HY) -10400 + (ID) 2750
Total energy: -210901.0 ( -116.13 by residue)
QMean score : 0.375
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