Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDSRPIGFLDSGVGGLTVVKEMFRQLPEEEVIFIGDQARAPYGPRPAQQIREFTWQMVNFLLT-KNVKMIVIACNTATAVAWQEIKEKLDIPVLGVILPGASAAIKSTNSGKVGIIGTPMTVKSDAYRQKIQALSPNTAVVSLACPKFVPIVESNQMSSSLAKKVVYETLSPLVG-KLDTLILGCTHYPLLRPIIQNVMGAEVKLIDSGAETVRDISVLLNYFEINHNWQNKHGGHHFYTTASPKGFKEIAEQWLSQEINVERIVL
1ZUW Chain:A ((1-266))
MLEQPIGVIDSGVGGLTVAKEIMRQLPKENIIYVGDTKRCPYGPRPEEEVLQYTWELTNYLLENHHIKMLVIACNTATAIALDDIQRSVGIPVVGVIQPGARAAIKVTDNQHIGVIGTENTIKSNAYEEALLALNPDLKVENLACPLLVPFVESGKFLDQTADEIVKTSLYPLKDTSIDSLILGCTHYPILKEAIQRYMGEHVNIISSGDETAREVSTILSYKGLLNQS-PIAPDHQFLTTGARDQFAKIADDWF----HVECISL
General information:
TITO was launched using:
RESULT:
Template:
1ZUW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -220976 for 2353 contacts (-93.9/contact) +
2D Compatibility (PS) -27716 + (NN) -5872 + (LL) 520
1D Compatibility (HY) -28400 + (ID) 6300
Total energy: -288744.0 ( -122.71 by residue)
QMean score : 0.606
(partial model without unconserved sides chains):
PDB file :
Tito_1ZUW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZUW-query.scw
PDB file :
Tito_Scwrl_1ZUW.pdb
: