Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MLTIGVLGL-QGAVREHIHAIEACGAAGLVVKRPEQLN--EVDGLILPG-GESTTMRRLIDTYQFMEPLREFAAQGKPMFGTCAGLIILAKEIAGSDNPHLGLLNVVVER-NSFGRQVDSF------EADLTIKGLDEPFTGVFI---------RAPHILEAGENVEVLSEHNGR--IVAAKQGQFLGCSFHPELTEDHRVTQLFVEMVEEYKQKALV----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
| 1JVN Chain:A ((1-555)) | GSHMPVVHVIDVESGNLQSLTNAIEHLGYEVQLVKSPKDFNISGTSRLILPGVGNYGHFVDNLFNRGFEKPIREYIESGKPIMGIVGLQALFAGSVESPKSTGLNYIDFKLSRFDDSEKPVPEIGWNSCIPSENLFFGLDPYKRYYFVHSFAAILNSEKKKNLENDGWKIAKAKYGSEEFIAAVNKNNIFATQFHPEKS--GKAGLNVIENFLKQQSPPIPNYSAEEKELLMNDYSNYGLTRRIIACLDVRTNDQGDLVVTKGDLGKPVQLAQKYYQQGADEVTFLNITDCPLKDTPMLEVLKQAAKTVFVPLTVGGGIKDIVDVDGTKIPALEVASLYFRSGADKVSIGTDAVYAAEKYYELGNRGDGTSPIETISKAYGAQAVVISVDPKRVYVNSQADTKNKVFETEYPGPNGEKYCWYQCTIKGGRESRDLGVWELTRACEALGAGEILLNCIDKDGSNSGYDLELIEHVKDAVKIPVIASSGAGVPEHFEEAFLKTRADACLGAGMFHRGEFTVNDVKEYLLEHGLKVRMDEE |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JVN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -110786 for 1480 contacts (-74.9/contact) +
2D Compatibility (PS) -20803 + (NN) -4060 + (LL) 28
1D Compatibility (HY) -8400 + (ID) 2100
Total energy: -146121.0 ( -98.73 by residue)
QMean score : 0.430
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