Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKADKALLIVDMINNFEFDMGETLAK-KTEKIVPHILSLKEHARQNEWPIIYINDHYGLWQA---DIKNIQQEC-TNERSKDIITKIAPV-------DADYFLIKPKHSAFYETALHTLLTELQVRHIIITGIAGNICVLFTANDAYMREYSITIPKDCIASNSDEDNEFALTMMENVLFAEITTEEQIIEK
3O94 Chain:A ((21-208))
---MTKALISIDYTEDFVADSGKLTAGAPAQAISDAISKVTRLAFERGDYIFFTIDAHEENDCFHPESKLFPPHNLIGTSGRNLYGDLGIFYQEHGSDSRVFWMDKRHYSAFSGTDLDIRLRERRVSTVILTGVLTDISVLHTAIDAYNLGYDIEIVKPAVASIWPENHQFALGHFKNTLGAK-LVDENLNE-
General information:
TITO was launched using:
RESULT:
Template:
3O94.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -120345 for 1506 contacts (-79.9/contact) +
2D Compatibility (PS) -18394 + (NN) -1075 + (LL) 512
1D Compatibility (HY) -5600 + (ID) 2450
Total energy: -147352.0 ( -97.84 by residue)
QMean score : 0.406
(partial model without unconserved sides chains):
PDB file :
Tito_3O94.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3O94-query.scw
PDB file :
Tito_Scwrl_3O94.pdb
: