Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAISWKEMNELQPRVMKLLYNSIEKDRLSHAYLFEGKKGTGKLDAALLLAKSFFCLEG-GAEPCESCRNCKRIESGNHPDLHLVQPDGLSIKKAQ-IQALQEEFSKTGLESHKKLYIISHADQMTANAANSLLKFLEEPNKDTMAVLITEQPQRLLDTIISRCQTLPFQPLQPKAIEDRLIEQDVSPHMARLLANMTNNVAEAVELSRNDEFAESRAKVIKLYEVLHQRKGHAFFFIQDQWMPFFKEKTHQEMGLDMLLLIYRDVLSIQIGNEDKLIYQDLFQSIKQHALQSTQQSVTNQILAVLEAKKRLHSNVNVQGLMEHLVLMLQEG
1NJF Chain:C ((28-194))-----------QEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIEQGRFVDL--IEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQIRHQL-------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1NJF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -74407 for 1238 contacts (-60.1/contact) +
2D Compatibility (PS) -18139 + (NN) -10152 + (LL) 15404
1D Compatibility (HY) -10000 + (ID) 3000
Total energy: -100294.0 ( -81.01 by residue)
QMean score : 0.593

(partial model without unconserved sides chains):
PDB file : Tito_1NJF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1NJF-query.scw
PDB file : Tito_Scwrl_1NJF.pdb: