Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVSLHDDERLDYLLAEDMKIIQSPTVFAFSLDAVLLSKFAYVPIQKGKIVDLCTGNGIVPLLLSTRS--KADILGVEIQERLHDMAVRSVEYNKLDDQIQIIHDDLKNMPEKLGHNRYDVVTCNPPYFKTPKQTEQNMNEHLRIARHEIHCTLEDVISVSSKLLKQGGKAALVHRPGRLLEIFELMKAYQIEPKRVQFVYPKQGKEANTILVEGIKGGRPDLKILPPLFVYDEQNEYTKEIRTILYGDK |
| 3TMA Chain:A ((194-321)) | ----------------------------------ALLRLADAR-PGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLS-WIRFLRADARHLP--RFFPEVDRILANPPHGL----------------KEGLFHLYWDFLRGALALLPPGGRVALLTLRPA----------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TMA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -53992 for 932 contacts (-57.9/contact) +
2D Compatibility (PS) -13038 + (NN) -4653 + (LL) 9828
1D Compatibility (HY) -2400 + (ID) 1200
Total energy: -65455.0 ( -70.23 by residue)
QMean score : 0.473
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