Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDYLVKALAYDGKVRAYAARTTDMVNEGQRRHGTWPTASAALGRTMTASLMLGAMLKGDDKLTVKIEGGGPIGAIVADANAKGEVRAYVSNPQVHFDLNEQGKLDVRRAVGTNGTLSVVKDLGLREFFTGQVEIVSGELGDDFTYYLVSSEQVPSSVGVGVLVNPDNTILAAGGFIIQLMPGTDDETITKIEQRLSQVEPISKLIQKGLTPEEILEEVLGEKPEILETMPVRFHCPCSKERFETAILGLGKKEIQDMIEEDGQAEAVCHFCNEKYLFTKEELEGLRDQTTR |
| 1G39 Chain:A ((1-28)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MVSKLSQL--QTELLAALLESGLSKEALIQ--------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1G39.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -112 for 113 contacts (-1.0/contact) +
2D Compatibility (PS) -2929 + (NN) -610 + (LL) 16424
1D Compatibility (HY) -2800 + (ID) 400
Total energy: 9573.0 ( 84.72 by residue)
QMean score : 0.642
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