Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNNIAYIALGSNIGDRETYLRQAVALLHQHAAVTVTKVSSIYETDPVGYEDQAQFLNMAVEIKTSLNPFELLELTQQIENELGRTREV-RWGPRTADLDILLFNRENIETEQLIVPHPRMYERLFVLAPLAEICQQVEKEATSAETDQEGVRVWKQKSGVDEFVHSES
3HSJ Chain:A ((2-135))
---VAYIAIGSNLASPLEQVNAALKALGDIPESHILTVSSFYRTPPLGPQDQPDYLAAAVALETSLAPEELLNHTQRIELQQGRVRKAERWGPRTLDLDIMLFGNEVINTERLTVPHYDMKNRGFMLWPLFEIAPEL-------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3HSJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -106629 for 968 contacts (-110.2/contact) +
2D Compatibility (PS) -13534 + (NN) -1657 + (LL) 2088
1D Compatibility (HY) -9600 + (ID) 3150
Total energy: -132482.0 ( -136.86 by residue)
QMean score : 0.536
(partial model without unconserved sides chains):
PDB file :
Tito_3HSJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HSJ-query.scw
PDB file :
Tito_Scwrl_3HSJ.pdb
: