Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPRKGPVAKRDVLPDPIYNSKLVSRLINKMMIDGKKGKSQTILYKSFDIIKERTGNDAMEVFEQALKNIMPVLEVKARRVGGANYQVPVEVRPERRTTLGLRWLVNYARLRGEKTMEERLANEILDAANNTGAAVKKREDTHKMAEANKAFAHYRW
1RSS Chain:A ((12-156))
-----------LQPDLVYGDVLVTAFINKIMRDGKKNLAARIFYDACKIIQEKTGQEPLKVFKQAVENVKPRMEVRSRRVGGANYQVPMEVSPRRQQSLALRWLVQAANQRPERRAAVRIAHELMDAAEGKGGAVKKKEDVERMAEA-----HYRW
General information:
TITO was launched using:
RESULT:
Template:
1RSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31757 for 1026 contacts (-31.0/contact) +
2D Compatibility (PS) -15416 + (NN) -7272 + (LL) 748
1D Compatibility (HY) -12800 + (ID) 3650
Total energy: -70147.0 ( -68.37 by residue)
QMean score : 0.636
(partial model without unconserved sides chains):
PDB file :
Tito_1RSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1RSS-query.scw
PDB file :
Tito_Scwrl_1RSS.pdb
: