Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIPEKKSIAIMKELSIGNTKQMLMINGVDVKNPLLLFLHGGPGTPQIGYVRHYQKELEQYFTVVHWDQRGSGLSYSKRISHHSMTINHFIKDTIQVTQWLLAHFSKSKLYLAGHSWGSILALHVLQQRPDLFYTYYG--ISQVVNPQDEESTAYQHIREISESKKASILSFLTRFIGAPPWKQDIQHLIYRFCVELTRGGFTHRHRQSLAVLFQMLTGNEYGVRNMHSFLNGLRFSKKHLTDELYRFNAFTSVPSIKVPCVFISGKHDLIVPAEISKQYYQELEAPEKRWFQFENSAHTPHIEEPSLFANTLSRHARHHL |
| 3BF8 Chain:A ((1-255)) | -----------MKLNIRAQTAQNQHNN-----SPIVLVHGLFGSLD--NLGVLARDLVNDHNIIQVDVRNHGLSPREP----VMNYPAMAQDLVDTLDAQ----QIDKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSESDAQTRQQAAAIMRQHLN------------------------EEGVIQFLLKSFVDGEW------------RFNVPVLWDQYPHIVGWEKIPAWDHPALFIPGGNSPYVSEQYRDDLLAQF--PQARAHVIAGAGHWVHAEKPDAVLRAIRRYLNDH- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3BF8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -127157 for 2140 contacts (-59.4/contact) +
2D Compatibility (PS) -26673 + (NN) -6522 + (LL) 5240
1D Compatibility (HY) -8000 + (ID) 2350
Total energy: -165462.0 ( -77.32 by residue)
QMean score : 0.456
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