Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence---------------MKGSLSEHKAGNRRFTLYLPPSYSTDSGG----FPAVYVQDGSSLFQNQIELLESAFQQQRLPE----LVLIGIEPENRL---DEYTPWP----AASLSDRFTDFGGMGYHYLSDITNQFIPLIEENWNVTREPQSRGMIGASLGGLISMFAILK-YP-------SMFGKIGSISGSYWYENAAETIHISSLKPGTARVFMSIGSEEGREKQSIQRHMLKKTKQVHQSLKEKGFTED--------QLCLSIEKGAVHHHKYFCKQFINALEWLYGKNRSTL
1PV1 Chain:A ((1-299))MKVVKEFSVCGGRLIKLSHNSNSTKTSMNVNIYLPKHYYAQDFPRNKRIPTVFYLSGLTC--TPDNASEKAFWQFQADKYGFAIVFPDTSPRGDEVANDPEGSWDFGQGAGFYLNATQEPYAQHYQMYDYIHKELPQTLDSHFNKLDFLDNVAITGHSMGGYGAICGYLKGYSGKRYKSCSAFAPIVNPSNVPWGQKAFKGYLGEWEAYDPCLLIKN---IRHVGDDRILIHVGDSDPFLEEHLKPELLLEAVKATSWQDYVEIKKVHGF-DHSYYFVSTFVPEHAEFHARNLGLI


General information:
TITO was launched using:
RESULT:

Template: 1PV1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -60177 for 2036 contacts (-29.6/contact) +
2D Compatibility (PS) -25550 + (NN) -2280 + (LL) 448
1D Compatibility (HY) -8000 + (ID) 2200
Total energy: -97759.0 ( -48.02 by residue)
QMean score : 0.327

(partial model without unconserved sides chains):
PDB file : Tito_1PV1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1PV1-query.scw
PDB file : Tito_Scwrl_1PV1.pdb: