Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEMMIKKRIKQVKKGDQDAFADIVDIYKDKIYQLCYRMLGNVHEAEDIAQEAFIRAYVNIDSFDINRKFSTWLYRIATNLTIDRIRKKKPDYYLDAEVAGTEGLTMYSQIVADGVLPEDAVVSLELSNTIQQKILKLPDKYRTVIVLKYIDELSLIEIGEILNIPVGTVKTRIHRGREALRKQLRDL
2O7G Chain:A ((9-91))
--EAVTALALSAAKGNGRALEAFIKATQQDVWRFVAY-LSDVGSADDLTQETFLRAIGAIPRFSARSSARTWLLAIARHVVADHIR-----------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2O7G.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -60119 for 602 contacts (-99.9/contact) +
2D Compatibility (PS) -8957 + (NN) -3763 + (LL) 8588
1D Compatibility (HY) -4400 + (ID) 1100
Total energy: -69751.0 ( -115.87 by residue)
QMean score : 0.676
(partial model without unconserved sides chains):
PDB file :
Tito_2O7G.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2O7G-query.scw
PDB file :
Tito_Scwrl_2O7G.pdb
: