Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----MNSNGDKLSLSVQNLANTN--EITIVQAIGELKK-SGKDAIPVLVEALKEEGSLCNIAAA-VLGEFGEDASEAAEELSCLLKSHAEDT--RMAAAISLMRIGKPSLPFVIKIAQESE----GQSCFWASWCIAWIDPSCIEPKMYKCLKYEHEHPSGIVAPFAAEEALGKLIAFQLKDKED------------------------------------------------------------------------------------------------------------------ |
| 4D50 Chain:A ((1-290)) | GPLGSMVTEQEVDAIGQTLVDPKQPLQARFRALFTLRGLGGPGAIAWISQAFDDDSALLKHELAYCLGQMQD--ARAIPMLVDVLQDTRQEPMVRHEAGEALGAIGDPEVLEILKQYSSDPVIEVAETCQLAVRRLEWLQQHGGEPA-------AGPYLSVDPAPPAEERDVGRLREALLDESRPLFERYRAMFALRNAGGEEAALALAEGLHCGSALFRHEVGYVLGQLQHEAAVPQLAAALARCTENPMVRHECAEALGAIARPACLAALQAHADDPERVVRESCEVALDMYEHETG |
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General information:
TITO was launched using:
| RESULT:
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Template: 4D50.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -63569 for 1116 contacts (-57.0/contact) +
2D Compatibility (PS) -17116 + (NN) -13429 + (LL) 820
1D Compatibility (HY) -2800 + (ID) 1750
Total energy: -97844.0 ( -87.67 by residue)
QMean score : 0.366
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