Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEKQIISWITDYQNTGDEAVLRQVREVCWPIVEAVLQEKVMDDEQANNLREKGIERFPFIISKYQADVQLPVET--FLQNTYRFYF------HQVMRESS-
2FOK Chain:A ((287-386))-VPKRVYWEMLATNLTDKEYVRTRRALILEILIK--AGSLKIEQIQDNLKKLG---FDEVIETIENDIKGLINTGIFIEIKGRFYQLKDHILQFVIPNRLV


General information:
TITO was launched using:
RESULT:

Template: 2FOK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 287 -32366 -112.77 -376.34
target 2D structure prediction score : 0.51
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : -112.77
2D Compatibility (Sec. Struct. Predict.) : 0.51
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.314

(partial model without unconserved sides chains):
PDB file : Tito_2FOK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2FOK-query.scw
PDB file : Tito_Scwrl_2FOK.pdb: