Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLKELFVNLTILITFNYLFTHLFKERLVHKKDSISFQAVKGLACGLLGVILMVFGFTYQHSIIDLRNIPIMIAALYGGWVSTATALAMITAGRLLITMNTSALYSVIIICIAAIPSLIVSRRKKVQLKHAFYLLIITNSLISFSFYFLIDLHSYELHLYFWIISIAGGMLSLYIIDHETNAHLLFKQYKFQAHFDFLTGVYNRRKFEETTKALYQQAADTPHFQFALIYMDIDHFKTINDQYGHHEGDQVLKELGLRLKQTIRNTDPAARIGGEEFAVLLPNCSLDKAARIAERIRSTVSDAPIVLTNGDELSVTISLGAAHYPNNTEQPGSLPILADQMLYKAKETGRNRVCFSEKKE
4ZVF Chain:A ((1-163))-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MDVLTKLLNRRFLPTIFKREIAHANR-TGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNG-HPDYERLIQIADEALYIAKRRGRNRVELWKAS-


General information:
TITO was launched using:
RESULT:

Template: 4ZVF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 748 -105376 -140.88 -646.48
target 2D structure prediction score : 0.71
Monomeric hydrophicity matching model chain A : 0.57

3D Compatibility (PKB) : -140.88
2D Compatibility (Sec. Struct. Predict.) : 0.71
1D Compatibility (Hydrophobicity) : 0.57
QMean score : 0.540

(partial model without unconserved sides chains):
PDB file : Tito_4ZVF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4ZVF-query.scw
PDB file : Tito_Scwrl_4ZVF.pdb: