Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKTIVFKCGGSVIRELSEEFYQNLKELRASGWKLAIVHGGGPEITNMLKRLNIKTEFSGGQRKTTKPVLEVAEMVLSGSVNKFFVAELAKHGLRAAGISGKDGGLLEADYLDPETYGEVGEIKKVDASMVNALMENGIIPVIAPLSMTSDCKTLNVNADLAASAVAGALEADKLMFVTDVDGIMKEKQRLDVLTPKEIQMLIKQEVITGGMIPKVNSALSALSDQVSEVMIVNGKGSFFAEQTFQGTKIVKAKEAVS
3ZZF Chain:B ((52-227))-----VIKVGGAIISDNLHELASCLAFLYHVGLYPIVLHGTGPQVNGRLEAQGIEPDYIDGIRITDEHTMAVVRKCFLEQ-NLKLVTALEQLGVRARPITS---GVFTADYLDKDKYKLVGNIKSVTKEPIEASIKAGALPILTSLAETASGQMLNVNADVAAGELARVFEPLKIVYLNEKGGII-------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3ZZF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 861 -114991 -133.55 -653.36
target 2D structure prediction score : 0.74
Monomeric hydrophicity matching model chain B : 0.69

3D Compatibility (PKB) : -133.55
2D Compatibility (Sec. Struct. Predict.) : 0.74
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.485

(partial model without unconserved sides chains):
PDB file : Tito_3ZZF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3ZZF-query.scw
PDB file : Tito_Scwrl_3ZZF.pdb: