Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMITMENIVRDGHPALRETAEPVELPPTDAEKQQLADMIEFVKNSQNPELAEKYKLRPGVGLAAPQINIKKRMIAVH-AEDASGKLYSYALFNPKIVSHSVEKSYLTSGEGCLSVDEAIPGY---VPRYARIRVKGTTLEGENIDIRLKGFPAIVFQHEIDHLNGVMFYDHIDKENPFKEPENAIAIER
1LRY Chain:A ((4-147))-----NILEFPDPRLRTIAKPVEVV-DDAVRQLIDDMFETMYEA------------PGIGLAATQVNVHKRIVVMDLSEDKSE---PRVFINPEF--EPLTEDMDQYQEGCLSV----PGFYENVDRPQKVRIKALDRDGNPFEEVAEGLLAVCIQHECDHLNGKLFVDYL-----------------


General information:
TITO was launched using:
RESULT:

Template: 1LRY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 682 -58917 -86.39 -420.83
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain A : 0.77

3D Compatibility (PKB) : -86.39
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.388

(partial model without unconserved sides chains):
PDB file : Tito_1LRY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1LRY-query.scw
PDB file : Tito_Scwrl_1LRY.pdb: