Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVTVREAKLEDIKDIAKVHVDSWRTTYHEIIPIDYLNSLNYKEFEDKWKSRS--LKGVFVAQDEKGSVFGFASFGPIRSEQEGYDGELYAIYLLEERQRQGAGRALLAKGAEFLLQHGFSSMFVWVI--EQN-PSIIFYQAYSPERVAEDNFEIA--GVRLKEVGLGWPDLSALKTLLNR
5DWM Chain:A ((9-177))MPVIRDFQPADIETITAIYTQAVLTGTGSYEIE-P---PTMDEMAKRFAAFADQGFPILVAEA-DGRVLGYAYASYFRVRPAYRWLAEDSIYIAPDAKGQGIGKLLLRELIARISALGFRQLLAVIGDGEHNIGSVKLHESLGFTHCGRIEGSGFKHGRWLDTVLMQLPLNGGR------


General information:
TITO was launched using:
RESULT:

Template: 5DWM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 747 -25070 -33.56 -154.75
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.71

3D Compatibility (PKB) : -33.56
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.446

(partial model without unconserved sides chains):
PDB file : Tito_5DWM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5DWM-query.scw
PDB file : Tito_Scwrl_5DWM.pdb: