Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMENFTYYNPTKLIFGKGQLEQLRKEFKRYGKNVLLVYGGGSIKRNGLYDQVTGILKEEGAVVHELSGVEPNPRLATVEKGIGLCREHDIDFLLAVGGGSVIDCTKAIAAGVKYDGDAWDIFSKKVTAEDALPFGTVLTLAATGSEMNPDSVITNWETNEKFVWGSNVTHPRFSILDPENTFTVPENQTVYGMVDMMSHVFEQYFHNVENTPL------QDRMCFAVLQTVIETAPK-------LLEDLENYELRETILYAG-TIALNGTLQMG-YFGDWASHTMEHAVSA---VYDIPHAGGLAILFPNWMRYTLDTNVGRFKNLMLNMFDIDTEGKTDKEIALEGIDKLSAFWTSLGAPSRLADYNIGEEKLELIADIAAKE---MEHGGFGNFQKLNKDDVLAILRASL
4MCA Chain:A ((2-355))--LRIIQSPGKYIQGANALAAVGQYAKSLADHYLVIADDFVMKLA--GDTLMGSLQQHGVKHH-AALFNGECCHKEIDRLGRELKAHGCRGVIGVGGGKTLDTAKAIAHY------------------QQLPVVLIPTIASTDAPTSALSVIYTEQG-EFAEYLIYPRNPDMVVMDVAIIAKAPVRLLVAGMGDALSTYFEAQACFDAQ-ATSMAGGKSTLAALSLARLCYDTLLAEGVKAKLAVEAGVVTEAVERIIEANTYLSGIGFESSGLA----AAHAIHNGFTVLEECHHLYHGEKVAFGTLAQ--------------LVL--QNS----------PMAQIETVLAFCHRIGLPITLAEMGVSGDAVEKIMAVAQASCAAGE-TIHNMPFKVTPAGVQAAILTA-


General information:
TITO was launched using:
RESULT:

Template: 4MCA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1981 -160129 -80.83 -480.87
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : -80.83
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.505

(partial model without unconserved sides chains):
PDB file : Tito_4MCA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4MCA-query.scw
PDB file : Tito_Scwrl_4MCA.pdb: