Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMKKMLLFLIIAAVSMLTIAGCSSQSSSADGKVTLKFFHRWPKEPEKSYFEEVVKEFEKDHPDIDIQIEAVLNDSYKDKIKVMLGTTSPPDIYFSWSDEFAFKFIRGNKALDLSSYYKNDTDWSSQLVQSQITPFTYENKQYGVPWQMDAKSFFYNKDIFQKLNLDPPKTWDELIDVSKKLKEHGYTPISFGTKATWTISHYIGTLNQRMVDEKTREKDYNAKTGEFTDEGYVKALEKLQELMPYFNKHVNSVDHEYVRQQFKSGKSAMIYAETAEIKLVE--PVNLGMFPFPEISGQKGSSEALTGAPEGFMISSRTKHPKEAMEFLQFLTSKRMGEKLVKDVGKYSAVQGTATEENATAIQREAVQHIVDAKSMVPWFDMDVDVEVADAYLTGVQQMLGGDMTPQQVMKAVQKAAKQVRASAE-----------------------------------------------------------------------------------------------------------
1Y4C Chain:A ((4-493))------------------------------EGKLVIWIN--GDKGYNGLAEVGKKFEKDT---GIKVTVEHPDKLEEKFPQVAATGDGPDIIFWAHDRFG-GYAQSGLLAEITPDKAFQDKLYPFTWDA----VRYNGKLIAYPIAVEALSLIYNKDLLPN----PPKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPLIAADGGYAFKYE--NGKYDIKDVGVDNAGAKAGLTFLVDLIKN-KHMNADTDYSIAEAAFNKGETAMTINGPWAWSNIDTSKVNYGVTVLPTFKGQPSKP---FVGVLSAGINAASPNKELAKEFLENYLLTDEGLEAVNKDKPLGAVALKSYEEELAK-DPRIAATMENAQKGEIMPNIPQMSAFWYAVRTAVINAASGRQTVDEALKDAQTNSSSLGIEGRSSEELLKIALQEAQKTLQQAQELAKKGGGEEQLKRALKRADRNLWAAQELAKKGGGGEELLKQALQQAQQLLRQAQELAKKGGGEELLKQALQQAQQLLQQAQELAK


General information:
TITO was launched using:
RESULT:

Template: 1Y4C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2119 -22274 -10.51 -60.04
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : -10.51
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.412

(partial model without unconserved sides chains):
PDB file : Tito_1Y4C.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1Y4C-query.scw
PDB file : Tito_Scwrl_1Y4C.pdb: