Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQLQVMNSPFNQEQAELLNRLLPTLTESQKIWLSGYLSAQSVSAQEAAGTPAAAVSAEAPAPAVSKEVTVLYGSQTGNAQGLAENAGKQLEQSGFQVTVSSMSDFKPNQLKKVTNLLIVVSTHGEGEPPDNALSFHEFLHGRRAPKLEDLRFSVLALGDSSYEFFCQTGKEFDQRLEELGGKRISPRVDCDLDYDEPAAEWLEGVLKGLNEAGGGSAAPAPAAASQTGESSYSRTNPFRAEVLENLNLNGRGSNKETRHVELSLEGSGLTYEPGDSLGVYPENDPELVELLLKEMNWDPEEIVTLNKQGDVRPLKEALISHYEITVLTKPLLEQAAQLTGNDELRELLAPGNEENVKAYIEGRDLLDLVRDYGPFSVSAQEFVSILRKMPARLYSIASSLSAN---PDEVHLTIGAVRY-DAHGRERKGVCS-ILCAERLQPGDTLPVYVQHNQNFKLPKDPETPIIMVGPGTGVAPFRSFM-----QEREETGAEGKAWMFFGDQHFVTDFLYQTEWQNWLKDGVLT--KMDVAFSRDTE----EKVYVQHRMLEHSAELFEWL-QEGAAVYICGDEKHMAHDVHNTLLEIIEKEGNMSREEAEAYLADMQQQKRYQRDVY
3W5V Chain:A ((92-293))------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VRLYSIASSAIGDFGDSKTVSLCVKRLIYTNDAGEIVKGVCSNFLC--DLQPGDNVQITGPVGKEMLMPKDPNATIIMLATGTGIAPFRSFLWKMFFEKHDDYKFNGLGWLFLGVPT-SSSLLYKEEFGK-MKERAPENFRVDYAVSREQTNAAGERMYIQTRMAEYKEELWELLKKDNTYVYMCG-LKGMEKGIDDIMVSLAEKDG-------------------------


General information:
TITO was launched using:
RESULT:

Template: 3W5V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 741 21857 29.50 118.15
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : 29.50
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.493

(partial model without unconserved sides chains):
PDB file : Tito_3W5V.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3W5V-query.scw
PDB file : Tito_Scwrl_3W5V.pdb: