Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKGVILAGGNGSRLMPLTKAVNKHLLPVGPYPMIYWSIMKLQEAGIKDILLISQKEHMPQFYKLLGNGEELGVTITYQVQPAASGISDGLSYAKRFTKKESFILLLGDNIF-EDSLKPYTERFEQQGKGAKVLLKEVDDPERFGIAEIDEKNKRIRSIIEKPEQPPTNLCVTGIYMYDAEVFSYIEQISPSKRGELEITDVNNLYIENSQLTYDVLS-GW-WVDAGTHESLYLASQLVHQALRKGQDEK
5IFY Chain:F ((12-247))-KGIILAGGSGTRLYPITHAVSKQLLPVYDKPMIYYPLSTLMIAGIRDVLIISTPQDTPRFESMLGDGSQWGMNIQYATQPSPDGLAQAFVIGRDFVGNEPSALILGDNIFYGHDLAKQLERASAKDTGATVFAYHVQDPERYGVVEFDREFRAI-SIEEKPAKPRSSYAVTGLYFYDRQVCDIAADIKPSARGELEITDVNSRYLAAGQLDVELMGRGYAWLDTGTHDSLIEAGTFI-----------


General information:
TITO was launched using:
RESULT:

Template: 5IFY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain F - contact count / total energy / energy per contact / energy per residue : 1267 -80345 -63.41 -344.83
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain F : 0.84

3D Compatibility (PKB) : -63.41
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.84
QMean score : 0.570

(partial model without unconserved sides chains):
PDB file : Tito_5IFY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5IFY-query.scw
PDB file : Tito_Scwrl_5IFY.pdb: