Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVSG-SDSRSEPS-QL-SDRDLVESVLRDLSEAADKWEALVTQAETVTYSVDLGDVRAVANSDGRLLELTLHPGV-MTGYAHGE-LADRVNLAITALRDEVEAENRAR-YGGRLQ
1J8B Chain:A ((7-98))
LGGLMKQAQQQEKMQKMQEE---------------------IAQLEVTGESGAGLVKITINGAHNCRRIDIDPSLMED---DKEMLEDLIAAAFNDAVRRAEELQKEKMASVTAG
General information:
TITO was launched using:
RESULT:
Template:
1J8B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 10748 for 444 contacts (24.2/contact) +
2D Compatibility (PS) -8562 + (NN) -2081 + (LL) 2124
1D Compatibility (HY) 2400 + (ID) 300
Total energy: 4329.0 ( 9.75 by residue)
QMean score : 0.288
(partial model without unconserved sides chains):
PDB file :
Tito_1J8B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1J8B-query.scw
PDB file :
Tito_Scwrl_1J8B.pdb
: