Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGEFDPKLRFAQSPVARLATSTPDGTPHLVPVVFALGARRPAEATGADVIYTAVDAKRKTTQRLRRLANLEHNPRASVLVDSYADDWTQLWWVRADGVAAIHRDGEVM-RAAYRLLRAKYAQY----------QS--VPLNGPVIAIAVQRWASWHA
2AQ6 Chain:A ((6-144))
-FDDKLLAVISGNSIGVLATIKHDGRPQLSNVQYHFDPRK-------LLIQVSIA------EPRAKTRNLRRDPRASILVDADDG-W---SYAVAEGTAQLTPPAAAPDDDTVEALIALYRNIAGEHSDWDDYRQAMVTDRRVLLTLPISHVYGLPP
General information:
TITO was launched using:
RESULT:
Template:
2AQ6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -66456 for 941 contacts (-70.6/contact) +
2D Compatibility (PS) -14051 + (NN) -6871 + (LL) 1232
1D Compatibility (HY) -5200 + (ID) 1350
Total energy: -92696.0 ( -98.51 by residue)
QMean score : 0.388
(partial model without unconserved sides chains):
PDB file :
Tito_2AQ6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2AQ6-query.scw
PDB file :
Tito_Scwrl_2AQ6.pdb
: