Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPAIVLIGAQWGDEGKGKATDLLGGRVQWVVRYQGGNNAGHTVVLPTGENFALHLIPSGVLTPGVTNVIGNGVVIDPGVLLNELRGLQDRGVDTAKLLISADAHLLMPYHIAIDKVTERYMGSKKIGTTGRGIGPCYQDKIARIGIRVADVLDPEQLTHKVEAACEFKNQVLVKIYNRKALDPAQVVDALLEQAEGFKHRIADTRLLLNAALEAGETVLLEGSQGTLLDVDHGTYPYVTSSNPTAGGAAVGSGIGPTRIGTVLGILKAYTTRVGSGPFPTELFDEHGEYLSKTGREFGVTTGRRRRCGWFDAVIARYAARVNGITDYFLTKLDVLSSLESVPVCVGYEIDGRRTRDMPMTQRDLCRAKPVYEELPGWWEDISGAREFDDLPAKARDYVLRLEQLAGAPVSCIGVGPGREQTIVRRDVLQDRP |
3R7T Chain:A ((5-419)) | SKADIIVGIQWGDEGKGKVVDKLCENYDFVCRSAGGHNAGHTIWV-NGVRYALHLMPSGVLHPRCINIIGNGVVVSPEVLIAEMAQFENL---KGRLYISDRAHLNLKHHSLIDIAKEKLKGK--------GIGPSYADKINRTGHRVGELLEPQRLCEALIKDFEANKTFFE-MLEIEIPSAEELLADLKRFNEILTPYITDTTRMLWKALDEDKRVLLEGAQGSMLDIDHGTYPYVTSSSTISAGTLTGLGLNPKEAGNIIGIVKAYATRVGNGAFPTEDKGEDGEKIAQIGKEIGVSTGRKRRCGWFDAVAVRYTARLNGLDALSLMKLDVLDGFEKIKICRAYEYKGMEIDYIPSD---LENVQPIYEEMDGWDK-VFGIKDYDLLPENAKKYIARLEELAGVKVKYISTSPERDDTIIL-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3R7T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -222590 for 3572 contacts (-62.3/contact) +
2D Compatibility (PS) -43878 + (NN) -19013 + (LL) 524
1D Compatibility (HY) -33200 + (ID) 9000
Total energy: -327157.0 ( -91.59 by residue)
QMean score : 0.515
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