Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTEHTDFELLELATPYALNAVSDDERADIDRRVAAAPSPVAAAFNDEVRAVRETMAVVSAATTAEPPAHLRTAILDATKPEVRRQSRWRTAAFASAAAIAVGLGAFGLGVLTRPSPPPTVAEQVLTAPDVRTVSRPLGAGTATVVFSRDRNTGLLVMNNVAPPSRGTVYQMWLLGGAKGPRSAGTMGTAAVTPSTTATLTDLGASTALAFTVEPGTGSPQPTGTILAELPLG |
3HUG Chain:B ((25-86)) | ------HHYAMWDAAYVLGALSAADRREFEAHLAGC-----PECRGAVTELCGVPALLSQLDRDEVAAISESA--------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HUG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -13046 for 334 contacts (-39.1/contact) +
2D Compatibility (PS) -6296 + (NN) 1658 + (LL) 8644
1D Compatibility (HY) -3200 + (ID) 600
Total energy: -12840.0 ( -38.44 by residue)
QMean score : 0.574
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