Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAGVSEAERRGHRKLVRFQARRAIGPIRPTSAAWDRDFDPAGKRIAVVGTDAAAAHYISRLSES--------------AASVTVFTQAPRRVVTGVPLWTTRAKRWLRRRTGAEHPAVAWAT-AAIDALTSSGIRT----SDG----VEHPVDAIIYGTGFAIADQVGDQ----TL-VGAGGVTIRQAWDDGMEPYLGVAVHGFPNYFFITGPD------T----AAQARCVVECMKLMERTASRRIEVRRSSQQVFNERAQLKPAQPHRQTGGLEAFDLSSAATEDDQTYDGAATLTLAGARFRVRVRLTGHLDPIDGNYHWQGTVFDSLPETSLTHARAATLTIGGRSAPARITEQTPWGTHSVAGVGPPPYARSGPASATT |
| 4G6H Chain:A ((216-400)) | ----------------------------------------RLLSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIV-LNMFE---KKLSSYAQSHLEN--TSIKVHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLIWATGNKARPVITDLFKKIPEQNSSKRGLA-------VNDF--LQVKGSNNIFAIGDNAFAGLPPTAQVAHQEAEYLAKNFDKMA------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4G6H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -82863 for 929 contacts (-89.2/contact) +
2D Compatibility (PS) -16756 + (NN) -9744 + (LL) 10840
1D Compatibility (HY) -6400 + (ID) 1100
Total energy: -106023.0 ( -114.13 by residue)
QMean score : 0.370
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