Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MARQVFDDKLLAVISGNSIGVLATI--KHDGRPQLSNVQYHFDPRKLLIQVSIAEPRAKTRNLRRDPRASILV---DADDGWSYAVAEGTAQLTPPAAAPDDDTVEALIALYRNIAGEHSDWDDYRQAMVTDRRVLLTLPISHVYGLPPGMR------------------------------------------------------------------------------------------ |
2ARZ Chain:A ((5-242)) | --SVEAAKNARELLLKEYRAVLSTHSKKWPGFPFGSVVPYCLDAEGR-PLILISRIAQHTHNLQADPRCSMLVGERGAEDIQAVGRLTLLAEARQLAEEEVAAAAERYYRYFPESAD-YHRVHDFDFWVLQPVQWRFIGGFGAIHWLAAERVPLANPFAGEAERGMVEHMNSDHAAAIAHYVELAGLPAHAAAQLAGIDTEGFHLRIGQGLHWLPFPAACGNPGAVRQALVQLARAERWPTV |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ARZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -48653 for 1014 contacts (-48.0/contact) +
2D Compatibility (PS) -15882 + (NN) -10860 + (LL) 632
1D Compatibility (HY) -3600 + (ID) 1400
Total energy: -79763.0 ( -78.66 by residue)
QMean score : 0.337
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