Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTRVVVIGSGFAGLWAALGAARRLDELAVLAGTVDVMVVSNKPFHDIRVRNYEADLSA-----CRIPLGDVLGPAGVAHVTAEVTAIDADGRRVTTSTGASYSYDRLVLASGSHVVKPALPGLAEF---GFDVDTYDGAVRLQQHLQGLAGGPLTSAAATVVVVGAGLT------GIETACELPGRLHALFARGDG-VTPRVVLIDHNPFVGS---DMGLSARPVIEQALLDNGVETRTGVSVAAVSPGGVT----LSSGERLAAATVVWCAGM-----RASRLTEQ-LPVARDRLGRLQVDDYLRVIGVPAMFAAGDVAAARMDDEH----LSVMSCQHGRPMGRYAGCNVINDLFDQPLLALRI-PWYVTVLDLGSAGAVYT-EGW--E--RKVVSQGAPAKTTKQSINTRRIYPPLNGSRADLLAAAAPRVQPRP |
| 3SX6 Chain:A ((4-417)) | SAHVVILGAGTGGMPAAYEMKEALG------SGHEVTLISANDYFQFVPSNPWVGVGWKERDDIAFPIRHYVERKGIHFIAQSAEQIDAEAQNITLADGNTVHYDYLMIATGPKLAFENVPGSDPHEGPVQSICTVDHAERAFAEYQALL------REPGPIVIGAMAGASCFGPAYEYAMIVASDLKKR---GMRDKIPSFTFITSEPYIGHLGIQGVGDSKGILTKGLKEEGIEAYTNCKVTKVEDNKMYVTQVDEKGETIKEMVLPVKFGMMIPAFKGVPAVAGVEGL-CNPGGFVLVDEHQRSKKYANIFAAGIAIAIPPVETTPVPTGAPKTGYMIESMVSAAVHNIKADLEGRKGEQTMGTWNAVAFADMGDRGAAFIALPQLKPRKVDVFAYGRWVHLAKVAFEKYFIRKMKMGVSEPFYEKV-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SX6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -246010 for 3105 contacts (-79.2/contact) +
2D Compatibility (PS) -40496 + (NN) -6378 + (LL) 1408
1D Compatibility (HY) -9200 + (ID) 3800
Total energy: -304476.0 ( -98.06 by residue)
QMean score : 0.404
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