Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MCQTCRVGKRRDAREQIEAKIVELGRRQLLDHGAAGLSLRAIARNLGMVSSAVYRYVSSRDELLTLLLVDAYSDLADTVDRARDDTVADSWSDDVIAIARAVRGWAVTNPARWALLYGSPVPGYHAPPDRTAGVATRVVGAFFDAIAAGIATGDIRLTDDVAPQPMSSDFEKIRQEFGFPGDDRVVTKCFLLWAGVVGAISLEVFGQYGADMLTDPGVVFDAQTRLLVAVLAEH
2F07 Chain:A ((4-195))
---------MPKQTSGKYEKILQAAIEVISEKGLDKASISDIVKKAGTAQGTFYLYFSSKNALIPAIAENLLTHTLDQIKGRLHG--DEDFWTVLDILIDETFLITERHKDIIVLCYSGLAIDH--SMEKWETIYQPYYSWLEKIINKAIANHEVTE------------------------GINSKWTARTIINLVENTAERFYIGFEQ---DENVEVYKKEIFTFLKRSLG--
General information:
TITO was launched using:
RESULT:
Template:
2F07.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -115823 for 1373 contacts (-84.4/contact) +
2D Compatibility (PS) -20098 + (NN) -4943 + (LL) 2292
1D Compatibility (HY) -3200 + (ID) 1100
Total energy: -142872.0 ( -104.06 by residue)
QMean score : 0.465
(partial model without unconserved sides chains):
PDB file :
Tito_2F07.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2F07-query.scw
PDB file :
Tito_Scwrl_2F07.pdb
: