Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAVNRRVPRVRDLAPLLQFNRPQFDTSKRRLGAALTIQDLRRIAKRRTPRAAFDYADGGAEDELSIARARQGFRDIEFHPTILRDVTTVCAGWNVLGQPTVLPFGIAPTGFTRL---MHTEGEIAGARAAAAAGIPFSLSTLATCAIEDLVIAVPQGRK--WFQLYMWRDRDRSMALVRRVAAAGFDTMLVTVDVPVAGARLRDVR----NGMSIPPALTLRTVLDAMGHPRWWFDLLTTEPLAFASLDRWPGTVGEYLNTVFDPSLTFDDLAWIKSQWPGKLVVKGIQTLDDARAVVDRGVDGIVLSNHGGRQLDRAPVPFHLLPHV-----ARELGKHTEILVDTGIMSGADIVAAIALGARCTLIGRAYLYGLMAGGEAGVNRAIEILQTGVIRTMRLLGVTCLEELSPRHVTQLRRLGPIGAPT
1QCW Chain:A ((18-374))------------------------------LDNIINLYDFEYLASQTLTKQAWAYYSSGANDEVTHRENHNAYHRIFFKPKILVDVRKVDISTDMLGSHVDVPFYVSATALCKLGNPLEGEKDVARGCGQGVTKVPQMISTLASCSPEEIIEAAPSDKQIQWYQLYVNSDRKITDDLVKNVEKLGVKALFVTVDAPSLGQKEKDMKLKFS--------------------------------------------------KFIDPSLTWKDIEELKKKTKLPIVIKGVQRTEDVIKAAEIGVSGVVLSNHGGRQLDFSRAPIEVLAETMPILEQRNLKDKLEVFVDGGVRRGTDVLKALCLGAKGVGLGRPFLYANSCYGRNGVEKAIEILRDEIEMSMRLLGVTSIAELKP----------------


General information:
TITO was launched using:
RESULT:

Template: 1QCW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -245201 for 2809 contacts (-87.3/contact) +
2D Compatibility (PS) -34145 + (NN) -9664 + (LL) 5788
1D Compatibility (HY) -23600 + (ID) 5650
Total energy: -312472.0 ( -111.24 by residue)
QMean score : 0.539

(partial model without unconserved sides chains):
PDB file : Tito_1QCW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1QCW-query.scw
PDB file : Tito_Scwrl_1QCW.pdb: