Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MPRARWLQSAALMGALAVVLITAAPVAADAYQVPAP-PSPT--ASCDVISPVAIPCVALGKFADAVAAECRRVGVPDARCVLPLAHRVTQAARDAYLQSWVHRTARFQDALQDPVPLRETQWLGTHNSFNSLSDSFTVSHADSNQQLSLAQQLDIDVRALELDLHYLPRLEGHGAPGVTVCHGLGPKNANLGCTVEPLLATVLPQIANWLNAPGHTEEVILLYLEDQLKNASAYESVVATLDQVLRRADGTSLIYRPNPARRATNGCVPL-PLDVSREEIRASGA---RAVLVGSCAPGWSAAVFDWSGVELESGSNSGYRPYPACDATYGRGVYAWRLVRYYEDSTLATALANPTRPPANPQALTPPKVPAMT-------DCGVNLFGFDQLLPEDGRIQASLWSWAPDEPRAGAGACALQGADGRWVAASCGDPHPAACRDAAGRWTVTPAPVVFAGAALACTAIGADFTLPRTGNQNARLHAVAGPAGGAWVHYLLPP |
| 5EBB Chain:A ((1-410)) | PPAIGQFWHVTDLHLDPTYHITDDHTKVCASSKGANASNPGPFGDVLCD--SP--------------------------YQLILSAFDFIKNSGQEASFMIWTG----------DSPPH------------------VPVPELSTDTVINVITNMTTTIQSLFPNLQVFPAL-GN--------HDYWPQDQ-LPVVTSKVYNAVANLWKPWLD----------EEAISTLRKGGFYSQKVTTNPNLRIISLNTNLYYGPN--IMTLNKTDPANQFEWLESTLNNSQQNKEKVYIIAHVPVGYLPSSQNITAMR-EYYNEKLIDIFQKYSDVIAGQFYG----HTHRDSIMV--LSDKKGSPVNSLFVAPAVTPVKSVLEKQTNNPGIRLFQYD---PRDYKLLDMLQYYLNLTEANLKGESIWKLEYILTQTYDIEDLQPESLYGLAKQFTILDS----KQFIKYYNYFFVSYDSSVTCDKTCKAFQICAIMNLDNISYADC- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5EBB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -73521 for 3425 contacts (-21.5/contact) +
2D Compatibility (PS) -40953 + (NN) -9318 + (LL) 6632
1D Compatibility (HY) -12400 + (ID) 3150
Total energy: -132710.0 ( -38.75 by residue)
QMean score : 0.186
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