Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPELPEVEVVRRGLQAHVTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRGKYLWLTLNTAGVHRPTDTALVVHLGMSGQMLLGAV--PCAAHVRISALLDDGTVLSFADQRTFGGWLLADLVTVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLRRKHSELKRQLLDQRVVSGIGNIYADEALWRAKVNGAHVAATLRCRRLGAVLHAAADVMREALAKGGTSFDSLYVNVNGESGYFERSLDAYGREGENCRRCGAVIRRERFMNRSSFYCPRCQPRPRK |
1PJI Chain:A ((1-271)) | -PELPEVETVRRELEKRIVGQKIISIEATYPRMVL---TGFEQLKKELTGKTIQGISRRGKYLIFEIGD-------DFRLISHLRMEGKYRLATLDAPREKHDHLTMKFADGQLI-YADVRKFGTW---ELISTDQVLPYFLKKKIGPEPTYEDFDEKLFREKLRKSTKKIKPYLLEQTLVAGLGNIYVDEVLWLAKIHPEKETNQLIESSIHLLHDSIIEILQKAIKLGGSS------SALGSTGKMQNELQVYGKTGEKCSRCGAEIQKIKVAGRGTHFCPVCQQK--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1PJI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -114722 for 2159 contacts (-53.1/contact) +
2D Compatibility (PS) -28321 + (NN) -10534 + (LL) 1476
1D Compatibility (HY) -17200 + (ID) 4550
Total energy: -173851.0 ( -80.52 by residue)
QMean score : 0.478
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