Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSTPSATVAPVKRIPYAEASRALLRDSVLDAMRDLLLTRDWSAITLSDVARAAGISRQTIYNEFGSRQGLAQGYALRLADRLVDNVHASLDANVGNFYEAFLQGFRSFFAESAADPLVISLLTGVAKPDLLQLITTDSAPIITRASARLAPAFTDTWVATTDNDANVLSRAIVRLCLSYVSMPPEADHDVAADLARLITPFAERHGVINVP
3Q0V Chain:A ((48-112))
--------------------------AILATAENLLEDRPLADISVDDLAKGAGISRPTFYFYFPSKEAV----LLTLLDRVVNQADMAL-------------------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3Q0V.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35637 for 355 contacts (-100.4/contact) +
2D Compatibility (PS) -6673 + (NN) -3368 + (LL) 10820
1D Compatibility (HY) -6000 + (ID) 1100
Total energy: -41958.0 ( -118.19 by residue)
QMean score : 0.643
(partial model without unconserved sides chains):
PDB file :
Tito_3Q0V.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3Q0V-query.scw
PDB file :
Tito_Scwrl_3Q0V.pdb
: